Icy
Quantitative Image Analysis Unit @ Institut Pasteur
Overview
| Measured variables | length, surface, color, shape, count |
|---|---|
| Operating system | windows, linux, mac |
| Licence | freeware, open-source |
| Automation level | automated, manual, semi-automated |
| Plant requirements | any |
| Export formats | xls, csv |
| Other information | - |
Scientific article(s)
ICY: A new open-source community image processing softwareFabrice de Chaumont, Stephane Dallongeville, Jean-Christophe Olivo-Marin2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011 View paper
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Description
Icy is an open community platform for bioimage informatics. Icy provides the software resources to visualize, annotate and quantify bioimaging data - Rate and comment plugins - Graphical programming with protocols - Write scripts in javascript or python - Reactive forum and support - Native ImageJ integration - Native Micro-Manager integration - Share your plugins and protocols online - Search and install features directly from Icy - Intuitive user interface - Connect Icy to Matlab - Interactive widgets - Build your graphical interface with EzPlug - Use the power of your graphic card with OpenCL - Watch sequences in polarized stereo - Watch 3D data in ray-casting with VTK - Access images in MPEG video with Xuggler - Watch Matlab image in Icy with Matlab X-server - Customize your workspace