SeedExtractor
Feiyu Zhu, Puneet Paul, Hongfeng Yu, Harkamal Walia
Overview
| Measured variables | Area, Perimeter, Length, Width, Circularity, Color intensities |
|---|---|
| Operating system | macOS, Windows |
| Licence | Open source |
| Automation level | Automated |
| Plant requirements | Any |
| Export formats | Comma Separated Files, Excell |
| Other information |
Scientific article(s)
SeedExtractor: an open-source GUI for seed image analysisFeiyu Zhu,Puneet Paul,Waseem Hussain,Kyle Wallman,Balpreet K Dhatt,Jaspreet Sandhu,Larissa Irvin,Gota Morota,Hongfeng Yu,Harkamal Walia, 2020 View paper
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Description
Accurate measurement of seed size parameters is essential for both breeding efforts aimed at enhancing yields and basic research focused on discovering genetic components that regulate seed size. To address this need, we have developed an open-source graphical user interface (GUI) software, SeedExtractor that determines seed size and shape (including area, perimeter, length, width, circularity, and centroid), and seed color with the capability to process a large number of images in a time-efficient manner.